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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 110222.4
Min pTPM: 1648.6
Std pTPM: 18297.5
Median pTPM: 20167.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
110222.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
90862.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
74628.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
68672.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
58212.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
58151.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
54195.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
53245.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
52236.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
48205.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
45394.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
44273.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
43872.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
43340.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
43253.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
41398.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
39030.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
38242.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
36674.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
34209.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
34201.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
34169.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
33634.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
33416.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
32902.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
32607.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
32030.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
30980.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
30904.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
30372.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
29918.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
29767.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
28607.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
26231.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
25984.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
25428.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
25301.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
24954.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
24696.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
22805.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
22157.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
21001.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
20903.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
20452.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
19882.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
19755.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
19723.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
19231.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
18694.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
18636.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
18500.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
18443.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
18415.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
18302.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
18040.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
17392.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
17198.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
17081.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
16419.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
16122.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
15643.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
15561.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
15513.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
15499.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
15469.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
15171.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
15014.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
14997.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
14969.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
14764.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
14399.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
14302.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
14003.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
13401.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
13196.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
13090.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
12606.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
12462.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
12064.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
11418.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
11237.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
11067.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
10405.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
10094.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
8120.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
7571.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
7076.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
1648.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.