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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. pTPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in tubules: 60 Cells in glomeruli: 20 Fibroblasts: 5 Other cell types: 15
Female, age 67
Kidney sample 56 pTPM: 467.4
Cell types%
Cells in tubules: 70 Cells in glomeruli: 15 Fibroblasts: 10 Other cell types: 5
Female, age 55
Kidney sample 57 pTPM: 544.3
Cell types%
Cells in tubules: 80 Cells in glomeruli: 10 Fibroblasts: 5 Other cell types: 5
Male, age 46
Kidney sample 58 pTPM: 449.2
Cell types%
Cells in tubules: 60 Cells in glomeruli: 25 Fibroblasts: 5 Other cell types: 10
Female, age 57
Kidney sample 358 pTPM: 436.6
Cell types%
Cells in tubules: 60 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 20
Male, age 78
Kidney sample 377 pTPM: 741.7
Cell types%
Cells in tubules: 65 Cells in glomeruli: 10 Fibroblasts: 5 Other cell types: 20
Male, age 73
Kidney sample 380 pTPM: 814
Cell types%
Cells in tubules: 60 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 20
Female, age 59
Kidney sample 394 pTPM: 558
Cell types%
Cells in tubules: 65 Cells in glomeruli: 10 Fibroblasts: 10 Other cell types: 15
Female, age 48
Kidney sample 414 pTPM: 708.3
Cell types%
Cells in tubules: 60 Cells in glomeruli: 5 Fibroblasts: 10 Other cell types: 25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 3183.3
Min pTPM: 353.0
Std pTPM: 542.6
Median pTPM: 802.5
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
3183.3
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
2139.0
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
1706.1
GTEX-RN64-1626-SM-48FD7
50-59 years, male
1681.4
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
1593.1
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
1584.6
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
1560.6
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
1545.9
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
1352.3
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
1317.5
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
1308.9
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
1290.0
GTEX-N7MS-1626-SM-3LK5F
60-69 years, male
1276.0
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
1232.2
GTEX-13112-2126-SM-5GCO4
50-59 years, male
1066.4
GTEX-QLQW-1626-SM-4R1K1
30-39 years, male
1050.7
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1032.1
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
1018.3
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
1011.3
GTEX-12696-0926-SM-5FQTV
60-69 years, male
950.1
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
914.4
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
805.7
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
802.5
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
786.7
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
739.1
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
729.1
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
720.5
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
707.5
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
665.2
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
660.4
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
645.4
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
621.0
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
569.2
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
569.1
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
554.9
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
543.4
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
536.2
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
515.0
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
506.3
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
481.0
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
474.4
GTEX-14C39-2126-SM-664OH
40-49 years, male
470.2
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
415.9
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
365.2
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
353.0
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KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.