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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 44.4
Min pTPM: 0.0
Std pTPM: 13.0
Median pTPM: 17.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
44.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
44.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
44.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
40.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
36.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
34.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
34.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
32.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
32.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
31.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
30.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
29.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
28.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
28.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
28.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
27.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
27.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
27.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
26.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
26.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
26.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
26.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
25.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
25.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
24.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
23.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
23.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
23.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
23.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
22.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
22.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
21.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
21.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
20.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
20.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
19.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
19.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
19.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
19.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
18.8
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
18.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
18.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
18.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
17.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
16.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
16.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
14.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
13.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
13.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
13.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
13.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
12.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
12.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
11.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
11.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
10.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
9.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
8.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
8.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
0.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
0.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
0.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
0.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
0.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
0.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
0.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
0.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
0.0
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
0.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
0.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
0.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
0.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
0.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
0.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
0.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
0.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
0.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
0.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
0.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
0.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
0.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
0.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
0.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
0.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
0.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
0.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
0.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
0.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
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