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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO1 is prognostic, high expression is favourable in liver cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
10290.5
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
46106.5
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
43655.7
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
37776.5
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
30543.4
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
29979.1
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
29526.0
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
28056.1
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
27995.0
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
26978.7
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
26450.9
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
24337.7
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
24041.8
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
23802.8
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
23709.4
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
23485.8
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
22743.1
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
22423.7
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
22079.7
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
21934.0
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
21456.0
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
21371.7
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
21345.4
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
21198.0
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
20551.0
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
20445.2
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
20141.9
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
19774.1
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
19555.2
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
18823.7
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
18818.0
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
18752.6
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
18749.0
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
18651.1
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
18530.1
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
18397.6
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
18227.3
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
18042.1
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
18008.8
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
17486.6
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
17333.4
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
17248.0
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
17159.4
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
17129.8
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
17072.2
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
16970.8
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
16945.6
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
16903.8
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
16478.9
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
16327.1
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
16125.5
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
16109.6
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
15709.0
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
15700.2
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
15471.4
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
15342.7
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
15183.2
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
15170.4
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
14924.5
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
14863.0
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
14807.7
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
14649.8
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
14645.7
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
14531.9
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
14483.4
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
14428.3
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
14352.0
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
14326.8
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
14261.5
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
14237.2
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
14194.6
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
14070.6
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
13850.8
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
13770.3
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
13718.0
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
13661.4
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
13606.7
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
13516.8
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
13494.3
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
13488.5
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
13467.9
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
13436.6
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
13391.3
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
13310.8
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
13264.5
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
13121.3
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
13103.8
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
13102.5
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
13031.8
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
13027.9
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
12805.2
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
12749.8
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
12656.0
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
12595.1
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
12414.4
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
12411.5
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
12297.8
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
12294.0
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
12236.7
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
12229.9
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
12217.7
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
12158.8
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
12157.6
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
12114.9
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
12094.0
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
12056.3
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
11981.2
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
11974.5
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
11930.1
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
11894.3
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
11886.9
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
11873.6
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
11752.8
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
11747.4
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
11723.7
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
11530.1
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
11513.0
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
11422.5
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
11388.3
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
11378.4
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
11371.5
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
11349.5
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
11344.9
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
11294.5
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
11266.2
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
11210.0
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
11073.7
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
11004.8
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
10985.8
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
10939.5
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
10839.0
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
10775.3
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
10678.5
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
10635.7
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
10620.5
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
10614.1
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
10568.2
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
10551.8
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
10487.7
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
10485.5
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
10413.0
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
10390.4
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
10334.7
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
10298.8
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
10290.7
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
10256.6
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
10144.1
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
10116.6
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
10060.5
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
10058.5
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
10012.8
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
10008.7
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
9952.0
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
9945.7
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
9877.3
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
9859.6
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
9858.3
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
9831.9
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
9796.6
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
9792.4
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
9779.9
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
9765.3
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
9761.4
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
9622.4
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
9622.2
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
9522.5
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
9491.0
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
9468.3
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
9445.8
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
9403.5
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
9353.2
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
9328.6
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
9324.9
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
9263.1
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
9230.3
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
9192.0
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
9186.9
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
9142.0
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
9127.7
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
9049.6
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
9034.3
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
8969.3
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
8931.7
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
8924.1
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
8894.5
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
8829.3
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
8819.5
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
8802.7
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
8769.4
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
8767.7
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
8763.2
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
8731.2
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
8647.7
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
8646.8
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
8590.5
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
8568.6
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
8548.5
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
8531.4
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
8492.6
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
8486.7
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
8477.4
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
8435.1
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
8325.2
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
8259.8
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
8207.2
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
8186.7
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
8166.7
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
8150.4
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
8063.5
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
8060.0
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
8053.1
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
7996.5
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
7962.1
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
7938.5
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
7878.3
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
7873.7
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
7851.9
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
7777.5
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
7774.3
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
7768.6
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
7648.9
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
7625.9
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
7579.4
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
7564.8
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
7522.9
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
7498.9
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
7493.6
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
7488.1
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
7471.7
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
7440.3
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
7394.5
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
7384.6
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
7376.0
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
7346.9
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
7336.6
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
7324.9
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
7307.5
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
7300.6
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
7293.1
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
7266.5
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
7217.9
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
7204.8
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
7180.2
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
7168.1
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
7136.5
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
7103.2
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
7059.0
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
7047.9
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
7009.2
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
6962.0
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
6939.4
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
6888.7
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
6886.9
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
6857.7
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
6856.7
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
6840.7
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
6838.3
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
6818.0
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
6810.0
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
6801.7
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
6794.7
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
6723.6
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
6721.7
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
6702.1
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
6668.2
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
6613.6
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
6605.2
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
6595.3
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
6562.8
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
6549.3
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
6538.1
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
6509.3
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
6507.0
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
6491.6
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
6403.8
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
6375.5
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
6374.3
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
6329.6
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
6288.5
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
6242.4
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
6177.1
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
6152.0
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
6129.7
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
6116.4
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
6085.6
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
6069.7
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
6036.0
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
6008.5
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
5832.8
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
5814.4
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
5692.0
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
5683.6
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
5592.1
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
5528.0
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
5524.4
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
5505.4
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
5432.9
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
5418.1
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
5371.8
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
5344.0
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
5320.9
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
5298.8
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
5296.5
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
5294.5
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
5291.2
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
5226.9
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
5129.8
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
5115.6
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
5077.6
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
5000.2
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
4965.2
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
4937.3
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
4926.4
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
4915.3
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
4890.7
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
4819.0
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
4817.6
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
4791.9
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
4759.8
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
4731.8
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
4602.1
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
4549.4
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
4534.6
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
4518.7
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
4461.2
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
4364.5
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
4296.3
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
4243.3
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
4202.6
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
3987.2
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
3971.9
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
3962.8
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
3948.7
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
3887.9
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
3862.6
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
3791.2
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
3791.1
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
3785.3
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
3743.7
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
3718.3
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
3694.8
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
3680.2
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
3513.7
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
3505.7
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
3469.2
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
3434.6
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
3292.1
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
3178.7
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
3086.2
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
3050.2
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
2869.2
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
2861.1
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
2782.9
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
2749.6
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
2735.9
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
2639.9
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
2551.8
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
2537.1
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
2338.7
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
2279.9
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
2258.7
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
2135.6
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
2056.2
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
1996.0
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
1779.7
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
949.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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