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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
711.4
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
4790.4
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
4318.4
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
3679.8
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
3422.4
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
3370.2
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
3354.4
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
3334.4
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
2953.2
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
2686.5
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
2630.8
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
2532.7
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
2511.3
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
2507.3
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
2472.3
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
2230.8
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
2156.4
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
2146.5
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
2098.4
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
2070.0
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
1995.4
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
1981.3
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
1968.7
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
1927.2
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
1899.4
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
1888.0
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
1826.9
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
1824.3
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
1808.1
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
1805.0
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
1795.8
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
1795.3
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
1777.9
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
1760.0
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
1754.0
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
1745.4
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
1725.9
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
1719.0
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
1702.6
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
1661.9
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
1616.5
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
1616.0
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
1609.9
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
1568.8
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
1565.9
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
1557.5
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
1540.1
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
1524.6
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
1510.9
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
1499.1
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
1445.3
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
1432.9
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
1429.4
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
1398.9
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
1383.8
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
1382.7
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
1372.6
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
1365.8
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
1338.8
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
1324.2
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
1314.7
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
1301.9
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
1297.5
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
1286.1
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
1279.9
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
1274.0
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
1260.8
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
1259.2
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
1221.8
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
1171.4
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
1167.8
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
1160.5
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
1150.4
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
1144.5
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
1135.0
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
1122.8
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
1101.8
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
1096.6
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
1094.3
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
1088.6
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
1070.1
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
1048.5
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
1047.5
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
1028.5
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
1025.8
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
1021.9
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
1019.2
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
1009.8
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
1007.3
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
988.6
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
986.8
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
976.1
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
976.1
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
972.5
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
960.0
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
940.0
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
930.2
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
926.7
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
920.8
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
895.6
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
883.3
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
876.2
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
868.7
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
867.9
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
860.8
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
857.6
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
847.1
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
846.9
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
845.2
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
829.2
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
823.5
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
815.5
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
812.4
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
807.7
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
805.5
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
795.5
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
776.7
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
772.9
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
772.7
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
771.8
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
771.1
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
769.7
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
768.0
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
763.0
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
760.4
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
759.2
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
757.6
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
744.7
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
717.8
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
714.6
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
709.5
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
698.8
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
696.4
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
691.4
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
684.7
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
677.0
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
675.1
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
673.9
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
667.4
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
658.3
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
652.5
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
648.4
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
647.4
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
644.8
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
639.3
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
636.0
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
631.3
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
629.9
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
625.5
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
618.9
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
614.6
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
613.2
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
601.5
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
595.8
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
585.4
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
580.4
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
573.4
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
569.3
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
567.5
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
562.2
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
560.0
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
558.4
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
554.6
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
554.4
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
546.8
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
542.9
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
536.5
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
536.2
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
529.8
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
525.8
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
523.7
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
521.0
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
510.8
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
509.1
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
504.8
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
503.9
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
501.6
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
487.1
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
484.8
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
481.9
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
478.3
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
477.8
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
472.7
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
472.7
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
464.6
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
462.5
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
455.0
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
454.5
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
453.2
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
448.3
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
441.3
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
434.9
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
432.5
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
432.1
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
427.4
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
425.6
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
423.4
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
422.8
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
418.0
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
416.7
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
410.9
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
408.3
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
405.8
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
404.5
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
404.1
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
386.0
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
383.1
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
382.1
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
381.9
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
378.6
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
378.4
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
368.0
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
363.8
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
361.6
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
358.3
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
357.5
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
356.6
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
352.8
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
349.8
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
349.2
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
347.1
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
342.2
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
336.1
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
332.7
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
328.3
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
325.9
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
323.8
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
321.3
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
319.9
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
319.9
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
319.6
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
317.8
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
317.8
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
315.1
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
314.9
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
313.0
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
310.4
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
308.8
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
307.8
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
307.6
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
301.6
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
296.2
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
293.9
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
293.6
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
288.3
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
286.1
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
282.9
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
281.0
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
280.9
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
280.5
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
277.4
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
273.7
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
272.5
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
267.7
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
264.5
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
262.4
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
257.9
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
252.2
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
248.8
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
246.2
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
244.5
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
242.6
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
239.8
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
238.6
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
236.6
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
231.1
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
226.2
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
223.4
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
222.2
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
219.2
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
219.1
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
218.4
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
210.6
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
206.8
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
204.5
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
202.8
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
202.5
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
200.1
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
198.9
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
195.3
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
194.7
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
188.6
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
187.4
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
183.4
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
180.4
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
180.0
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
179.9
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
177.9
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
175.1
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
173.1
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
172.5
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
172.4
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
172.1
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
170.2
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
169.9
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
167.7
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
164.2
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
163.9
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
160.7
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
155.9
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
155.4
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
154.7
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
151.9
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
150.0
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
148.9
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
148.8
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
144.3
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
144.3
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
137.1
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
132.3
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
128.1
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
126.5
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
125.2
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
121.8
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
118.3
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
116.3
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
116.2
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
114.0
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
109.7
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
107.2
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
106.3
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
106.0
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
104.8
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
100.3
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
99.5
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
97.4
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
96.1
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
95.6
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
91.3
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
90.7
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
87.3
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
83.8
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
80.6
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
80.0
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
77.8
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
70.5
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
70.1
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
67.0
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
62.9
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
61.6
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
61.2
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
58.1
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
53.9
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
52.1
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
51.0
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
48.1
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
45.8
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
36.4
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
35.2
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
32.6
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
31.5
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
31.5
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
29.4
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
16.9
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
13.0
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
7.4
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
6.2
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
5.8
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
5.1
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
3.4
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
1.9
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
1.3
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
1.2
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
0.4
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
0.3
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
0.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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