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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO3 is prognostic, high expression is favourable in liver cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
11049.2
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
48732.0
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
48582.2
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
45796.4
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
44932.7
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
35066.7
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
32858.9
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
32597.1
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
27655.2
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
27223.3
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
27210.0
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
26370.8
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
25891.4
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
23710.5
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
23484.9
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
23066.5
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
23002.7
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
22450.0
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
22412.6
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
22085.2
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
21871.4
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
21040.0
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
20772.4
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
20583.1
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
20497.8
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
20246.2
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
20129.9
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
19974.2
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
19741.3
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
19491.6
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
19346.6
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
19326.8
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
18886.0
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
18720.0
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
18487.5
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
18395.3
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
17933.8
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
17677.3
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
17271.0
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
17154.8
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
17150.9
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
17128.7
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
17125.0
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
17124.3
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
17083.8
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
17079.2
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
17006.1
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
16956.7
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
16875.8
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
16704.4
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
16579.4
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
16537.3
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
16521.7
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
16437.1
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
16400.7
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
16400.1
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
16232.1
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
16193.1
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
16066.3
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
15907.0
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
15745.3
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
15725.6
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
15562.0
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
15528.8
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
15439.0
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
15433.2
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
15299.1
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
15154.5
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
15081.8
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
15035.6
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
14891.4
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
14890.9
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
14871.5
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
14686.1
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
14649.4
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
14603.9
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
14579.2
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
14420.9
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
14387.8
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
14229.7
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
14215.4
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
14147.6
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
14124.1
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
14005.3
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
13828.0
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
13748.9
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
13727.3
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
13712.1
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
13686.7
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
13523.4
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
13473.3
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
13455.5
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
13398.9
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
13265.7
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
13240.7
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
13157.0
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
13094.1
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
13035.0
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
13011.4
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
12901.4
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
12829.3
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
12788.4
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
12615.4
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
12521.4
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
12509.0
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
12481.8
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
12440.3
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
12415.3
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
12381.7
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
12306.6
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
12176.8
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
12160.0
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
12040.0
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
11982.4
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
11894.5
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
11875.7
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
11769.6
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
11764.9
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
11759.3
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
11717.7
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
11688.4
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
11665.7
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
11637.3
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
11633.7
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
11620.1
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
11614.8
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
11598.2
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
11512.8
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
11510.0
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
11426.0
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
11316.5
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
11312.0
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
11303.3
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
11258.4
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
11203.6
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
11177.1
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
11173.0
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
11166.1
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
11147.8
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
11097.3
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
11072.3
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
11061.3
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
11056.4
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
11029.3
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
11013.9
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
10985.9
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
10980.9
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
10969.0
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
10865.5
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
10852.2
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
10789.8
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
10728.8
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
10687.0
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
10614.8
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
10602.9
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
10541.0
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
10540.0
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
10518.8
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
10488.8
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
10480.5
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
10446.4
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
10429.9
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
10412.3
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
10404.6
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
10388.5
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
10370.8
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
10349.3
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
10338.8
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
10321.3
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
10297.4
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
10284.9
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
10255.7
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
10196.7
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
10195.5
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
10174.1
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
10158.8
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
10132.4
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
10106.5
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
10057.9
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
10043.4
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
10029.8
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
10020.0
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
9986.1
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
9982.6
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
9950.7
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
9908.1
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
9883.1
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
9868.0
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
9735.6
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
9702.0
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
9681.6
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
9606.7
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
9602.9
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
9583.5
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
9476.1
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
9465.9
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
9423.4
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
9408.5
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
9348.0
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
9292.9
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
9270.2
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
9251.5
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
9251.1
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
9217.0
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
9149.6
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
9146.3
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
9111.2
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
9086.2
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
9050.1
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
9025.1
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
8996.9
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
8929.4
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
8889.9
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
8868.7
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
8793.1
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
8705.8
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
8702.3
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
8663.8
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
8629.6
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
8609.7
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
8499.6
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
8483.6
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
8443.6
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
8441.4
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
8397.9
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
8379.5
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
8365.5
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
8322.8
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
8298.6
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
8291.2
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
8217.2
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
8182.2
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
8152.2
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
8138.0
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
8114.6
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
8091.3
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
8086.6
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
8081.2
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
8038.3
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
8031.6
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
8001.8
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
7969.9
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
7963.4
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
7904.6
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
7863.6
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
7763.2
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
7725.3
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
7706.4
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
7701.4
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
7691.5
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
7643.6
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
7618.6
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
7585.2
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
7582.4
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
7569.7
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
7565.4
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
7533.6
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
7415.8
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
7316.2
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
7312.0
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
7308.2
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
7295.8
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
7179.4
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
7141.3
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
7126.0
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
7048.2
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
7031.0
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
6982.2
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
6929.2
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
6918.0
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
6858.6
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
6839.7
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
6829.1
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
6821.1
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
6799.5
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
6751.2
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
6737.9
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
6725.7
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
6712.0
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
6689.3
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
6668.9
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
6666.3
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
6650.9
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
6584.2
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
6560.8
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
6525.1
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
6509.1
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
6485.7
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
6475.2
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
6464.0
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
6429.8
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
6408.5
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
6385.7
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
6285.9
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
6225.7
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
6202.2
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
6156.1
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
6138.6
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
6137.9
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
6112.7
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
6111.6
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
6105.8
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
6089.8
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
6082.6
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
6056.2
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
6040.1
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
6016.7
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
6006.0
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
5998.6
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
5921.0
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
5919.1
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
5879.1
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
5821.6
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
5763.6
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
5740.5
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
5700.1
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
5679.3
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
5637.3
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
5632.0
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
5630.0
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
5572.6
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
5541.4
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
5484.1
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
5465.6
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
5446.0
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
5325.0
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
5297.1
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
5196.5
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
5164.2
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
5030.8
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
4989.5
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
4943.5
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
4923.2
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
4805.3
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
4729.4
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
4583.9
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
4506.2
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
4489.2
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
4486.9
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
4449.8
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
4248.2
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
4237.6
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
4224.6
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
4187.6
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
4165.2
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
4156.8
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
3993.1
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
3927.1
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
3906.6
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
3897.8
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
3767.8
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
3613.1
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
3595.4
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
3528.6
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
3308.3
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
3297.7
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
3266.0
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
3053.3
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
2946.2
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
2902.6
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
2783.3
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
2351.5
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
2350.4
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
2135.3
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
1940.1
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
1447.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
The Human Protein Atlas project is funded
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