We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 962.3
Samples: 160
Max pTPM: 2520.1
Min pTPM: 179.4
Std pTPM: 396.2
Median pTPM: 894.9
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
2520.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
2332.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
2229.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
2173.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
2101.0
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
1945.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
1942.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
1938.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
1861.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
1860.2
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
1702.9
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1476.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
1439.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
1431.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
1399.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
1389.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1382.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
1378.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
1348.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
1339.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
1338.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
1335.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1329.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
1315.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
1294.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
1277.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
1265.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
1249.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
1215.3
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
1208.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
1200.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
1197.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
1182.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
1180.2
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
1167.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1163.2
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
1139.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
1122.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
1114.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
1112.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
1092.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
1081.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
1077.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
1055.1
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
1051.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1048.0
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
1045.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
1042.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
1041.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
1037.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
1034.1
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
1029.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
1015.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
1010.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
1008.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
1007.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
1005.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
1001.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
1001.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
996.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
996.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
991.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
977.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
975.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
969.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
967.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
961.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
961.2
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
961.2
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
954.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
949.7
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
944.0
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
940.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
938.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
922.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
921.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
913.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
909.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
896.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
895.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
894.4
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
891.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
890.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
886.8
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
880.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
877.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
877.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
876.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
872.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
856.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
851.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
841.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
834.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
833.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
832.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
828.6
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
823.9
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
822.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
822.8
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
820.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
817.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
808.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
802.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
792.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
782.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
780.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
766.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
765.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
763.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
757.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
754.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
753.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
738.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
736.2
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
736.1
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
733.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
727.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
725.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
715.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
715.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
711.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
709.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
702.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
694.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
690.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
681.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
674.6
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
668.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
652.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
643.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
637.7
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
636.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
634.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
631.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
624.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
619.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
618.6
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
603.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
593.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
589.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
587.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
586.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
583.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
576.0
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
560.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
540.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
530.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
527.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
521.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
516.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
511.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
476.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
448.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
434.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
431.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
406.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
368.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
350.0
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
293.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
179.4
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.