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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 848.4
Min pTPM: 87.3
Std pTPM: 117.2
Median pTPM: 311.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
848.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
715.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
536.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
529.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
483.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
481.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
465.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
463.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
454.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
436.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
435.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
433.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
430.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
423.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
417.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
413.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
401.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
401.1
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
399.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
399.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
399.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
398.2
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
392.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
392.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
379.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
375.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
375.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
375.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
370.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
369.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
369.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
368.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
368.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
366.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
364.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
363.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
362.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
361.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
354.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
352.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
352.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
351.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
351.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
351.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
350.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
347.2
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
344.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
343.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
340.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
339.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
337.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
337.1
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
331.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
330.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
328.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
319.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
319.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
319.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
317.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
313.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
313.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
311.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
310.6
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
306.4
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
304.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
300.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
297.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
296.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
295.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
290.7
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
290.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
289.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
285.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
284.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
280.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
274.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
272.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
268.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
265.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
262.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
254.6
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
254.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
248.0
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
243.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
243.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
238.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
237.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
236.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
229.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
224.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
220.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
218.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
216.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
215.3
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
210.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
209.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
208.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
207.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
206.0
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
202.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
200.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
191.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
187.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
186.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
175.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
172.4
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
167.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
166.0
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
162.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
159.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
156.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
155.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
152.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
150.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
148.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
138.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
132.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
120.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
104.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
100.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
100.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
95.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
87.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.